Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934602.1_cds_XP_016480621.1_72042
CDS Infomation

[gene=LOC107801753] [db_xref=GeneID:107801753] [protein=subtilisin-like protease SBT5.4] [protein_id=XP_016480621.1] [location=join(52346..52429,52845..52954,53028..53125,53349..53513,53592..53700,54251..54470,55028..55348,55871..55965,56337..56582,57490..57604,57700..57913,58408..58961)] [gbkey=CDS]
Sequence

ATGTCTTCTCCAAAAATTTCTATCTTGTTTCTTTTTCTCATTTTATTCTCCTTACGGACA
ACAACAGCTTCTGCGACCAAAAAGTCTTATGTGGTATATATGGGATCGCATTCTCATGGC
TCAGCTCTTACTAGGGCTATTCTCCAAAGGGTATCAGATTTCCACATTAACTTCCTCGCA
GCATTCTTGGGAGGCAAAGATAAAGCAAAGGAATCCATATTTTATTCATATAGAAGGCGT
ATTAACGGTTTTGCAGCTGATTTGGAAGAGAAATTTGTAGCTCTAATTCAATTGCATCCT
AAGGTGATTTCTGTTTTCCCAAATGAAAGGAGAGAATTACACACATTCCATTCTTGGGAT
TTTTTGTCTTTGGAAGACAATGGTGTAGTTACCTCAGGTTCTTTGTGGGAAAAAGCCAAG
TTTGGGCAAGACATTATCATTGGAAATCTCGATACAGGTGTTTGGCCAGAAAATCCAAGT
TTCAATGACGAAGGTTATGGGCCCATTCCATCAAGATGGAAGGGTGAATGTCAAAATGAC
GATAAGGTTCCATTTTCTTGCAATAGGAAGCTTATAGGCGCCAGGTATTTCCACAAAGGA
TATGATGATTTAAGGGGAAATAATAATACAAGTAATATTCCCAACTCTCCCCGTGATACC
GAAGGGCATGGAACACACACACTGTCCACTGCGGCTGGTAATTTTGCTCCCAAAGCAAGT
GTCATAGGAGTGTACAATGGCACTGCAAAAGGTGGTGCCCCTAAAGCTAGAGTTGCTGCT
TATAAGGTGTGTTGGCCAGCAAAACAAGGAGGAGGGTGTTTTGACGCTGATATCCTCAAA
GCATTCGATTTCGCCATAGATGATGGTGTTGATGTGATCTCTGCCTCTGTTGGTGGAAAA
CCACGGCCATATTTTAGAGACGCGGCGGCAATCGGGGCGTTTCACGCCATGAAAGAAGGT
ATCGTAGTGGTGACTTCTGCAGGAAACTCAGGACCTATGCTTTCAACTGTGGGCAATATT
GCACCTTGGATGATAACCGTGGGAGCAAGTACCATTGATCGTGAATTTGAATCCAATGTC
AAACTTCAAAATGGACTTACCATCAAGGGAACGAGCATTTCTTATCCATTGCCAGAAGAA
AAATTCTATCCACTTATTAATGGGGAGCAAGCTAAAACTGCAAATGCAACGGTTGGAGAT
GCTAAGCTTTGTAAGCAAGCAACATTGGATGCTAGTAAGGTGAAAGGGAGGATTTTGGTT
TGTTTAAGGGGAAATAACACGAGAGTAGATAAAGGGCACCAAGCTGTAATGGGAGGTGCT
GTTGGAATGATACTTTGCAATGACCAAACGAGTGGAAATGACATTATTGCAGACGTTCAT
CTCCTCCCAGCTTCCCATATTACTTACAACGACGGTCTTGCCGTTTTTGCCTACATCAAT
TCTACCAACAATGCTATGGGCTCAATAACCGCACCAAAGGCAACATTAGGTATAAAACCT
GCTCCAACTATGGCTTCTTTTTCATCCAGAGGTCCTAATTTGATTACACCTGCAATCCTC
AAGCCTGATATCACTGCACCTGGAGTGAATATTATAGCTGCCTACACCGAAGGAAATAAC
CCCTCAAATGAAGTATTTGACAATCGTAGAACAGCTTACAATGTAATGTCTGGAACATCA
ATGTCGTGTCCTCATGTCTCTGGGATTGTAGGACTTCTTAAAGCTATTCACCCTGATTGG
AGTCCTGCTGCCATTCGATCTGCTCTCATGACTACTGCAAGCCCAATAGATAATACAGGA
AAACCGTTGCTTGATACCACCAAGGAAGCAGCAACACCATTTGCATGTGGAGCTGGGCCT
ATAAGACCAAATCTTGCTTCTGATCCTGGACTAATATATGACTTAGAAGTGGATGATTAT
TTGAACTTTTTATGTGCATCTGGCTATGATAGTCAAGTTATTCGCACCTTCAACAAGGCT
CCTTATATATGTCCACCACTTAGTAATTCAAGTCTTTTGGAATTCAATTATCCTTCAATA
ACTGTTCCAGCTCTTTCTGGCAACTTAATTGTGACTCGTACACTGACAAATGTCGGTCCG
CCGGGTACTTTCACGGCTCGAGTTGGCCAGCCTCCTGGAATCTCAGTAGTTGTGGAACCA
AATGTGTTGATATTCAAGAGCCAAGGTCAGAAGGAGAGGTTTAGTTTGCATATTAAAGCT
GTGAATACTACTTATCTTGCTGGAGTGGATCAACACAAATATGGAGAGTTGGTATGGTCA
GATGGTACTCATACTGTCAGAAGCCCGATTACTGTGGAAATTGCACGTTGA

Peptide Sequence

PEP ID

XP_016480621.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT5.4 [Nicotiana tabacum]
Sequence

MSSPKISILFLFLILFSLRTTTASATKKSYVVYMGSHSHGSALTRAILQRVSDFHINFLA
AFLGGKDKAKESIFYSYRRRINGFAADLEEKFVALIQLHPKVISVFPNERRELHTFHSWD
FLSLEDNGVVTSGSLWEKAKFGQDIIIGNLDTGVWPENPSFNDEGYGPIPSRWKGECQND
DKVPFSCNRKLIGARYFHKGYDDLRGNNNTSNIPNSPRDTEGHGTHTLSTAAGNFAPKAS
VIGVYNGTAKGGAPKARVAAYKVCWPAKQGGGCFDADILKAFDFAIDDGVDVISASVGGK
PRPYFRDAAAIGAFHAMKEGIVVVTSAGNSGPMLSTVGNIAPWMITVGASTIDREFESNV
KLQNGLTIKGTSISYPLPEEKFYPLINGEQAKTANATVGDAKLCKQATLDASKVKGRILV
CLRGNNTRVDKGHQAVMGGAVGMILCNDQTSGNDIIADVHLLPASHITYNDGLAVFAYIN
STNNAMGSITAPKATLGIKPAPTMASFSSRGPNLITPAILKPDITAPGVNIIAAYTEGNN
PSNEVFDNRRTAYNVMSGTSMSCPHVSGIVGLLKAIHPDWSPAAIRSALMTTASPIDNTG
KPLLDTTKEAATPFACGAGPIRPNLASDPGLIYDLEVDDYLNFLCASGYDSQVIRTFNKA
PYICPPLSNSSLLEFNYPSITVPALSGNLIVTRTLTNVGPPGTFTARVGQPPGISVVVEP
NVLIFKSQGQKERFSLHIKAVNTTYLAGVDQHKYGELVWSDGTHTVRSPITVEIAR

Transcript Sequence

Gene sequence data has not been registered.